Molecular Biology Sites
Most Important Sites
Alphabetical listing of all Molecular Biology and Microbiology Sites
- ABCdb (ABC database)
- American Type Culture Collection Home Page
- Amplification assistant
(Promega expert system to trouble shoot PCR)
- Archives for Biological
Software and Databases Around the World
- Biochemical Pathways
(The complete Boehringer biocehemical pathway with hotlinks to enzyme data)
- BLAST (now via EXPASY) (Get
rid of all spaces, numbering etc leaving only bases or residues. Copy it into the sequence
section of the form using the clipboard)
- Biohunt (A Search engine to look for any
molecular biology package)
- BLAST (now via EXPASY) (Get
rid of all spaces, numbering etc leaving only bases or residues. Copy it into the sequence
section of the form using the clipboard, now email as well)
- BLAST via NCBI (The US site)
- BLAST via Japan (Alternative to
NCBI Blast, will send the results by email stops you waiting for ever
- Brenda (Enzyme database)
- Cambridge Crystallographic Data Centre
- Catalogue of Molecular Biology
Programs
- Chemical finder
- ClustalW
(Do multiple alignments of proteins or nucleic acids)
- EBI (European bioinformatics institute,
go here for database searches BLAST etc)
- ECDC homepage (E. coli genome
database, excellent site. includes fasta and blast against E.coli database. Terminators
promoters etc:- have a Captain Cook)
- EC Enzyme
- EcoCyc: Encyclopedia of E. coli Genes
and Metabolism
- E.coli index
- EcoSal (ASM Book)
- EMBL homepage
- Entrez
- Environmental Micro Web
Sites (lots of links to culture collections and bioluminescent bacteria)
- ExPASy
- GCG (This is the company address in the USA not the
analysis package)
- Genome Projects (This links to our own page with lots of
referring links)
- Google Scholar
- HGMP-RC (Main UK site for DNA/protein analysis,
replaces SEQNET)
- In silico site (has all genomes in
one site, you can display maps etc)
- KEGG (Kyoto Encyclopedia of Genes
and Genomes. Find ezymes and cross links from all the genome projects)
- MBCR Molecular Biology Computer Resources (A
very polished site worth a look, many search engines etc)
- Medline
- Membrane spanning loops
(HMM) (Find membrane spanning regions in integral membrane proteins)
- Membrane spanning
loops (DAS) (Find membrane spanning regions in integral membrane
proteins)
- Microbial Underground (Has a UK site which
is polished, very quick and lots of useful information)
- Microbes Info (Good general web
site for microbiology information)
- Molecular Cloning
(Sambrook 3rd ed online, but you need a password)
- MYCOGEN
- MSDS-chemical safety data (Good
for COSSH assessment)
- NCBI
- NIH DNA/Protein seq databases
- Nucleic Acids Data Base
- Pedro's Tools
(Lots of very useful tools)
- The Prokaryotes
(Springer Verlag Reference)
- Promoter
prediction
- Protein Science
(Sites of use for protein scientists)
- Protein crystalographic database
- Quorom sensing site (Quite
Slick)
- Regulatory Sequence Analysis
- RESTRICTION ENZYME BASE (Courtesy of
NEN)
- Rhizosphere web sites
- Rlv3841 annotation
(.xls)
- RNA
secondary structure prediction (eg stem loops)
- Salmonella Genetic Stock
Centre
- SANGER CENTRE HOME PAGE
- SCOP: Structural Classification of Proteins
- Swiss-Prot top page
- SwissShop (Email
SwissShop a search string and they will email you whenever a sequence that matches the
query enters their database)
- Technical Tips On Line
(You will need to register. This service is run by Elsevier and I believe is linked to
their trends series)
- Transport
database (Paulson's site)
-
Vector Nti
This page is maintained by
Philip Poole.
This page was last updated on
06-May-2010.